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Rats

Respiratory Infections in Rats

Respiratory disease is the leading cause of illness and death in pet rats, driven overwhelmingly by Mycoplasma pulmonis either alone or alongside viral and bacterial co-infections such as Sendai virus, Streptococcus pneumoniae or Cilia-Associated Respiratory bacillus.

By Dr Samuel Adeyemi, DVM, DACVIM

30 October 2025

4 min read

Respiratory Infections in Rats
Photographed for Dr Murphies · Small Pets

Medically reviewed

Reviewed by Dr Samuel Adeyemi, DVM, DACVIM of the Dr Murphies Veterinary Review Board. Reviewed content is checked against current consensus guidance before publication.

Respiratory disease is the leading cause of illness and death in pet rats, driven overwhelmingly by Mycoplasma pulmonis either alone or alongside viral and bacterial co-infections such as Sendai virus, Streptococcus pneumoniae or Cilia-Associated Respiratory bacillus. Because most pet rats carry Mycoplasma subclinically, disease onset is usually a story of stress or poor air quality tipping a stable carrier state into active infection.

Mycoplasma and the Multi-Agent Respiratory Complex

Mycoplasma pulmonis attaches to respiratory epithelium and, rather than killing cells outright, provokes a chronic inflammatory response that damages ciliary clearance and predisposes the airway to secondary bacterial invaders. Over months this produces progressive bronchiectasis, peribronchial cuffing and, ultimately, pneumonia or abscessation that can be seen radiographically as the disease advances.

Ammonia from soiled bedding is a major cofactor, since even low concentrations damage the respiratory epithelium's mucociliary escalator, impairing the rat's ability to clear bacteria and worsening any existing Mycoplasma infection; poor ventilation, dusty substrates and overcrowding compound this effect, which is why respiratory flares cluster in poorly maintained cages.

Ammonia, Dust and the Housing Factors That Trigger Flares

  • Audible clicking, snuffling or wheezing when breathing
  • Red-tinged discharge (porphyrin) around the eyes and nose
  • Laboured, exaggerated abdominal breathing effort
  • Reduced activity and hunched posture with ruffled fur
  • Head tilt in cases where infection extends to the inner ear

Porphyrin staining around the nose and eyes is a stress and illness marker in rats generally, not specific to respiratory disease alone, but combined with audible breathing sounds or laboured effort it strongly points toward an active flare needing treatment.

Recognising Chronic Versus Acute Respiratory Signs

Careful auscultation of all lung fields, ideally in a quiet room since rat respiratory sounds are subtle, helps localise disease and gauge severity, while thoracic radiographs identify the extent of consolidation, bronchiectasis or abscess formation guiding how aggressive treatment needs to be.

Because most pet rats are Mycoplasma-positive at baseline, diagnosis rests more on clinical signs and radiographic changes than on a single positive test result; culture and sensitivity of nasal or tracheal wash samples is occasionally used in refractory or recurrent cases to guide antibiotic choice.

Auscultation, Radiographs and Culture

Because Mycoplasma cannot be fully eradicated once established, treatment aims to control active flares, reduce inflammation and extend symptom-free periods rather than promising permanent cure.

  • Antibiotics effective against Mycoplasma such as doxycycline or enrofloxacin
  • Anti-inflammatory doses of meloxicam to reduce airway inflammation
  • Nebulisation with saline or antibiotic solution for severe active flares
  • Long-term intermittent antibiotic courses for rats with recurrent disease

Long-Term Antibiotic and Environmental Management

Environmental management is arguably as important as medication: using low-dust, absorbent bedding, spot-cleaning daily and fully changing bedding at least weekly, and ensuring good cage ventilation all reduce ammonia buildup that would otherwise undermine treatment gains.

Rats with a history of respiratory disease benefit from being kept in a stable, low-stress environment, since overcrowding, temperature extremes and new cage-mate introductions are recognised triggers for flares; owners should watch for early clicking or snuffling as a cue to seek treatment before signs progress to laboured breathing.

When to seek help urgently

  • Open-mouthed breathing or pronounced abdominal breathing effort
  • Blue or pale tinge to the lips, nose or paws
  • Sudden collapse or extreme lethargy alongside noisy breathing
  • Head tilt combined with circling, suggesting inner ear extension

Respiratory disease severity and the right antibiotic choice vary rat to rat, so this overview should not replace a proper veterinary assessment of your own rat's breathing and history.

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S

Dr Samuel Adeyemi, DVM, DACVIM

Internal medicine specialist